matplotlib example plot grid (snippet)

Python matplotlib example 'plot grid'

Modules used in program:

• import itertools as it
• import matplotlib.gridspec as gridspec
• import matplotlib.pyplot as plt
• import matplotlib
• import pandas as pd
• import numpy as np

python plot grid

Python matplotlib example: plot grid

%matplotlib inline


import numpy as np
import pandas as pd
import matplotlib
import matplotlib.pyplot as plt
import matplotlib.gridspec as gridspec
import itertools as it

font = {#'family' : 'normal',
        #'weight' : 'bold',
        'size'   : 20}

matplotlib.rc('font', **font)

fig_conf_curves = plt.figure(figsize=(12, 7))
gs_conf_curves = gridspec.GridSpec(1, 2)
axs = [fig_conf_curves.add_subplot(ss) for ss in gs_conf_curves]
for i in range(10):
    axs[0].plot(conf_curves[i, :, 0], conf_curves[i, :, 1])
    axs[1].plot(conf_curves[i, :26, 0], conf_curves[i, :26, 1])
for ax in axs:
    ax.set_xlabel('conservation bin')
axs[0].set_ylabel('BBL')
axs[0].set_title('conservation bin [0, 100]')
axs[1].set_title('conservation bin [0, 25]')
fig_conf_curves.suptitle(#
"""Confidence curves in 10 different sets of shuffle motifs
B_Atf1_primary, 10 * 10 shuffles, p_value_cutoff=1.3
"""
)
gs_conf_curves.tight_layout(fig_conf_curves, rect=[0, 0, 1, 0.88])
fig_conf_curves.savefig('./compareConfidenceCurves_B_Atf1_primary_curve.png')

Python links

• Learn Python: https://pythonbasics.org/
• Python Tutorial: https://pythonprogramminglanguage.com