Article Outline
Python pil example 'vgg19 chainer'
Functions in program:
def _retrieve(name, url, model):def _make_npz(path_npz, url, model):def _max_pooling_2d(x):def prepare(image, size=(224, 224)):
Modules used in program:
import numpyimport osimport collections
python vgg19 chainer
Python pil example: vgg19 chainer
from __future__ import print_function
import collections
import os
import numpy
try:
from PIL import Image
available = True
except ImportError as e:
available = False
_import_error = e
from chainer.dataset.convert import concat_examples
from chainer.dataset import download
from chainer import function
from chainer.functions.activation.relu import relu
from chainer.functions.activation.softmax import softmax
from chainer.functions.array.reshape import reshape
from chainer.functions.math.sum import sum
from chainer.functions.noise.dropout import dropout
from chainer.functions.pooling.max_pooling_2d import max_pooling_2d
from chainer.initializers import constant
from chainer.initializers import normal
from chainer import link
from chainer.links.connection.convolution_2d import Convolution2D
from chainer.links.connection.linear import Linear
from chainer.serializers import npz
from chainer.utils import argument
from chainer.utils import imgproc
from chainer.variable import Variable
class VGG19Layers(link.Chain):
"""A pre-trained CNN model with 19 layers provided by VGG team.
During initialization, this chain model automatically downloads
the pre-trained caffemodel, convert to another chainer model,
stores it on your local directory, and initializes all the parameters
with it. This model would be useful when you want to extract a semantic
feature vector from a given image, or fine-tune the model
on a different dataset.
Note that this pre-trained model is released under Creative Commons
Attribution License.
If you want to manually convert the pre-trained caffemodel to a chainer
model that can be specified in the constructor,
please use ``convert_caffemodel_to_npz`` classmethod instead.
See: K. Simonyan and A. Zisserman, `Very Deep Convolutional Networks
for Large-Scale Image Recognition <https://arxiv.org/abs/1409.1556>`_
Args:
pretrained_model (str): the destination of the pre-trained
chainer model serialized as a ``.npz`` file.
If this argument is specified as ``auto``,
it automatically downloads the caffemodel from the internet.
Note that in this case the converted chainer model is stored
on ``$CHAINER_DATASET_ROOT/pfnet/chainer/models`` directory,
where ``$CHAINER_DATASET_ROOT`` is set as
``$HOME/.chainer/dataset`` unless you specify another value
as a environment variable. The converted chainer model is
automatically used from the second time.
If the argument is specified as ``None``, all the parameters
are not initialized by the pre-trained model, but the default
initializer used in the original paper, i.e.,
``chainer.initializers.Normal(scale=0.01)``.
Attributes:
available_layers (list of str): The list of available layer names
used by ``__call__`` and ``extract`` methods.
"""
def __init__(self, pretrained_model='auto'):
if pretrained_model:
# As a sampling process is time-consuming,
# we employ a zero initializer for faster computation.
init = constant.Zero()
kwargs = {'initialW': init, 'initial_bias': init}
else:
# employ default initializers used in the original paper
kwargs = {
'initialW': normal.Normal(0.01),
'initial_bias': constant.Zero(),
}
super(VGG19Layers, self).__init__()
with self.init_scope():
self.conv1_1 = Convolution2D(3, 64, 3, 1, 1, **kwargs)
self.conv1_2 = Convolution2D(64, 64, 3, 1, 1, **kwargs)
self.conv2_1 = Convolution2D(64, 128, 3, 1, 1, **kwargs)
self.conv2_2 = Convolution2D(128, 128, 3, 1, 1, **kwargs)
self.conv3_1 = Convolution2D(128, 256, 3, 1, 1, **kwargs)
self.conv3_2 = Convolution2D(256, 256, 3, 1, 1, **kwargs)
self.conv3_3 = Convolution2D(256, 256, 3, 1, 1, **kwargs)
self.conv3_4 = Convolution2D(256, 256, 3, 1, 1, **kwargs)
self.conv4_1 = Convolution2D(256, 512, 3, 1, 1, **kwargs)
self.conv4_2 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv4_3 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv4_4 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv5_1 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv5_2 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv5_3 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.conv5_4 = Convolution2D(512, 512, 3, 1, 1, **kwargs)
self.fc6 = Linear(512 * 7 * 7, 4096, **kwargs)
self.fc7 = Linear(4096, 4096, **kwargs)
self.fc8 = Linear(4096, 1000, **kwargs)
if pretrained_model == 'auto':
_retrieve(
'VGG_ILSVRC_19_layers.npz',
'http://www.robots.ox.ac.uk/%7Evgg/software/very_deep/'
'caffe/VGG_ILSVRC_19_layers.caffemodel',
self)
elif pretrained_model:
npz.load_npz(pretrained_model, self)
@property
def functions(self):
return collections.OrderedDict([
('conv1_1', [self.conv1_1, relu]),
('conv1_2', [self.conv1_2, relu]),
('pool1', [_max_pooling_2d]),
('conv2_1', [self.conv2_1, relu]),
('conv2_2', [self.conv2_2, relu]),
('pool2', [_max_pooling_2d]),
('conv3_1', [self.conv3_1, relu]),
('conv3_2', [self.conv3_2, relu]),
('conv3_3', [self.conv3_3, relu]),
('conv3_4', [self.conv3_4, relu]),
('pool3', [_max_pooling_2d]),
('conv4_1', [self.conv4_1, relu]),
('conv4_2', [self.conv4_2, relu]),
('conv4_3', [self.conv4_3, relu]),
('conv4_4', [self.conv4_4, relu]),
('pool4', [_max_pooling_2d]),
('conv5_1', [self.conv5_1, relu]),
('conv5_2', [self.conv5_2, relu]),
('conv5_3', [self.conv5_3, relu]),
('conv5_4', [self.conv5_4, relu]),
('pool5', [_max_pooling_2d]),
('fc6', [self.fc6, relu, dropout]),
('fc7', [self.fc7, relu, dropout]),
('fc8', [self.fc8]),
('prob', [softmax]),
])
@property
def available_layers(self):
return list(self.functions.keys())
@classmethod
def convert_caffemodel_to_npz(cls, path_caffemodel, path_npz):
"""Converts a pre-trained caffemodel to a chainer model.
Args:
path_caffemodel (str): Path of the pre-trained caffemodel.
path_npz (str): Path of the converted chainer model.
"""
# As CaffeFunction uses shortcut symbols,
# we import CaffeFunction here.
from chainer.links.caffe.caffe_function import CaffeFunction
caffemodel = CaffeFunction(path_caffemodel)
npz.save_npz(path_npz, caffemodel, compression=False)
def __call__(self, x, layers=['prob'], **kwargs):
"""__call__(self, x, layers=['prob'])
Computes all the feature maps specified by ``layers``.
.. warning::
``test`` argument is not supported anymore since v2.
Instead, use ``chainer.using_config('train', train)``.
See :func:`chainer.using_config`.
Args:
x (~chainer.Variable): Input variable.
layers (list of str): The list of layer names you want to extract.
Returns:
Dictionary of ~chainer.Variable: A directory in which
the key contains the layer name and the value contains
the corresponding feature map variable.
"""
argument.check_unexpected_kwargs(
kwargs, test='test argument is not supported anymore. '
'Use chainer.using_config')
argument.assert_kwargs_empty(kwargs)
h = x
activations = {}
target_layers = set(layers)
for key, funcs in self.functions.items():
if len(target_layers) == 0:
break
for func in funcs:
h = func(h)
if key in target_layers:
activations[key] = h
target_layers.remove(key)
return activations
def extract(self, images, layers=['fc7'], size=(224, 224), **kwargs):
"""extract(self, images, layers=['fc7'], size=(224, 224))
Extracts all the feature maps of given images.
The difference of directly executing ``__call__`` is that
it directly accepts images as an input and automatically
transforms them to a proper variable. That is,
it is also interpreted as a shortcut method that implicitly calls
``prepare`` and ``__call__`` functions.
.. warning::
``test`` and ``volatile`` arguments are not supported anymore since
v2.
Instead, use ``chainer.using_config('train', train)`` and
``chainer.using_config('enable_backprop', not volatile)``
respectively.
See :func:`chainer.using_config`.
Args:
images (iterable of PIL.Image or numpy.ndarray): Input images.
layers (list of str): The list of layer names you want to extract.
size (pair of ints): The resolution of resized images used as
an input of CNN. All the given images are not resized
if this argument is ``None``, but the resolutions of
all the images should be the same.
Returns:
Dictionary of ~chainer.Variable: A directory in which
the key contains the layer name and the value contains
the corresponding feature map variable.
"""
argument.check_unexpected_kwargs(
kwargs, test='test argument is not supported anymore. '
'Use chainer.using_config',
volatile='volatile argument is not supported anymore. '
'Use chainer.using_config')
argument.assert_kwargs_empty(kwargs)
x = concat_examples([prepare(img, size=size) for img in images])
x = Variable(self.xp.asarray(x))
return self(x, layers=layers)
def predict(self, images, oversample=True):
"""Computes all the probabilities of given images.
Args:
images (iterable of PIL.Image or numpy.ndarray): Input images.
oversample (bool): If ``True``, it averages results across
center, corners, and mirrors. Otherwise, it uses only the
center.
Returns:
~chainer.Variable: Output that contains the class probabilities
of given images.
"""
x = concat_examples([prepare(img, size=(256, 256)) for img in images])
if oversample:
x = imgproc.oversample(x, crop_dims=(224, 224))
else:
x = x[:, :, 19:240, 19:240]
# Use no_backprop_mode to reduce memory consumption
with function.no_backprop_mode():
x = Variable(self.xp.asarray(x))
y = self(x, layers=['prob'])['prob']
if oversample:
n = y.data.shape[0] // 10
y_shape = y.data.shape[1:]
y = reshape(y, (n, 10) + y_shape)
y = sum(y, axis=1) / 10
return y
def prepare(image, size=(224, 224)):
"""Converts the given image to the numpy array for VGG models.
Note that you have to call this method before ``__call__``
because the pre-trained vgg model requires to resize the given image,
covert the RGB to the BGR, subtract the mean,
and permute the dimensions before calling.
Args:
image (PIL.Image or numpy.ndarray): Input image.
If an input is ``numpy.ndarray``, its shape must be
``(height, width)``, ``(height, width, channels)``,
or ``(channels, height, width)``, and
the order of the channels must be RGB.
size (pair of ints): Size of converted images.
If ``None``, the given image is not resized.
Returns:
numpy.ndarray: The converted output array.
"""
if not available:
raise ImportError('PIL cannot be loaded. Install Pillow!\n'
'The actual import error is as follows:\n' +
str(_import_error))
if isinstance(image, numpy.ndarray):
if image.ndim == 3:
if image.shape[0] == 1:
image = image[0, :, :]
elif image.shape[0] == 3:
image = image.transpose((1, 2, 0))
image = Image.fromarray(image.astype(numpy.uint8))
image = image.convert('RGB')
if size:
image = image.resize(size)
image = numpy.asarray(image, dtype=numpy.float32)
image = image[:, :, ::-1]
image -= numpy.array(
[103.939, 116.779, 123.68], dtype=numpy.float32)
image = image.transpose((2, 0, 1))
return image
def _max_pooling_2d(x):
return max_pooling_2d(x, ksize=2)
def _make_npz(path_npz, url, model):
path_caffemodel = download.cached_download(url)
print('Now loading caffemodel (usually it may take few minutes)')
VGG19Layers.convert_caffemodel_to_npz(path_caffemodel, path_npz)
npz.load_npz(path_npz, model)
return model
def _retrieve(name, url, model):
root = download.get_dataset_directory('pfnet/chainer/models/')
path = os.path.join(root, name)
return download.cache_or_load_file(
path, lambda path: _make_npz(path, url, model),
lambda path: npz.load_npz(path, model))
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